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SRX730360: Whole genome shotgun sequencing of Escherichia coli by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.5M spots, 541M bases, 339.8Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention (EDLB-CDC)
Study: PulseNet Escherichia coli and Shigella genome sequencing
PRJNA218110 • SRP046387 • All experiments • All runs
show Abstracthide Abstract
PulseNet STEC genome reference library
Sample:
SAMN03098253 • SRS719580 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: Escherichia coli Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Escherichia coli.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.17
Runs: 1 run, 1.5M spots, 541M bases, 339.8Mb
Run# of Spots# of BasesSizePublished
SRR16097071,494,173541M339.8Mb2014-10-11

ID:
1056272

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